annotate regexParser/cerium/CeriumMain.cc @ 286:555ca452f031

initialize state in stateSkip
author Shinji KONO <kono@ie.u-ryukyu.ac.jp>
date Sun, 31 Jan 2016 22:07:53 +0900
parents b74e3b4b11d7
children f2491681914e
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
266
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
1 #include <stdio.h>
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
2 #include <sys/time.h>
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
3 #include "TaskManager.h"
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
4 #include "SchedTask.h"
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
5 #include "Func.h"
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
6 #include "FileMapReduce.h"
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
7 #include "CeriumGrep.h"
272
5aa9d01926f1 Cerium version no compile errors
kono
parents: 271
diff changeset
8 #include "subsetConstruction.h"
5aa9d01926f1 Cerium version no compile errors
kono
parents: 271
diff changeset
9 #include "threadedSearch.h"
279
6cc1d9779f45 add CeriumMain.h
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 278
diff changeset
10 #include "CeriumMain.h"
266
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
11
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
12 extern void task_init();
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
13 void TMend(TaskManager *);
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
14 static double st_time;
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
15 static double ed_time;
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
16 const char* usr_help_str = "";
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
17
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
18 static double
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
19 getTime() {
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
20 struct timeval tv;
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
21 gettimeofday(&tv, NULL);
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
22 return tv.tv_sec + (double)tv.tv_usec*1e-6;
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
23 }
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
24
278
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
25 static
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
26 TSValue stateNothing(TSValue tsv) {
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
27 return tsv;
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
28 }
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
29
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
30 static
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
31 TSValue stateSkip(TSValue tsv) {
286
555ca452f031 initialize state in stateSkip
Shinji KONO <kono@ie.u-ryukyu.ac.jp>
parents: 281
diff changeset
32 tsv.current = tsv.tg->stateList->tState;
278
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
33 tsv.buff.matchBegin = tsv.buff.buffptr;
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
34 return tsv;
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
35 }
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
36
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
37 static
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
38 TSValue stateMatch(TSValue tsv) {
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
39 ResultPtr r = NEW(Result);
281
b74e3b4b11d7 parallel search done
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 280
diff changeset
40 r->continued = false;
278
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
41 r->begin = tsv.buff.matchBegin;
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
42 r->end = tsv.buff.buffptr;
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
43 *tsv.resultEnd = r;
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
44 r->next = NULL;
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
45 tsv.resultEnd = &r->next;
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
46 tsv.current = tsv.tg->stateList->tState;
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
47 tsv.buff.buffptr--;
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
48 tsv = stateSkip(tsv);
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
49 return tsv;
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
50 }
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
51
279
6cc1d9779f45 add CeriumMain.h
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 278
diff changeset
52 ResultPtr resultPrint(ResultPtr r,const char* comment) {
6cc1d9779f45 add CeriumMain.h
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 278
diff changeset
53 ResultPtr prev = NULL;
280
6bbd1cbf90d0 fix prev initialize in Print.c . Search in a block worked
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 279
diff changeset
54 // printf("%s\n",comment);
279
6cc1d9779f45 add CeriumMain.h
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 278
diff changeset
55 for (;r;r = r->next) {
281
b74e3b4b11d7 parallel search done
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 280
diff changeset
56 if (r->continued) {
279
6cc1d9779f45 add CeriumMain.h
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 278
diff changeset
57 prev = r;
6cc1d9779f45 add CeriumMain.h
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 278
diff changeset
58 break;
6cc1d9779f45 add CeriumMain.h
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 278
diff changeset
59 }
6cc1d9779f45 add CeriumMain.h
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 278
diff changeset
60 fwrite(r->begin,r->end - r->begin-1,1,stdout);
280
6bbd1cbf90d0 fix prev initialize in Print.c . Search in a block worked
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 279
diff changeset
61 puts("");
279
6cc1d9779f45 add CeriumMain.h
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 278
diff changeset
62 }
6cc1d9779f45 add CeriumMain.h
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 278
diff changeset
63 return prev;
6cc1d9779f45 add CeriumMain.h
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 278
diff changeset
64 }
6cc1d9779f45 add CeriumMain.h
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 278
diff changeset
65
278
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
66 void ceriumCreateAnyState(TransitionGeneratorPtr tg) {
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
67 tg->stateSkip = stateSkip;
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
68 tg->stateMatch = stateMatch;
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
69 tg->stateNothing = stateNothing;
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
70 createAnyState(tg);
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
71 generateTState(tg->anyState,tg);
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
72 // generateTState for startState. It is used in stateMatch.
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
73 generateTState(tg->stateList,tg);
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
74 }
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
75
266
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
76 int
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
77 TMmain(TaskManager *manager, int argc, char *argv[])
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
78 {
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
79 char *filename = 0;
271
6640b0d5bf13 remove anystate processing in sequential seqrch
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 268
diff changeset
80 st_time = getTime();
266
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
81 Search s = grep(argc,argv,true);
277
7b4bcc7b5ae6 nextTState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 272
diff changeset
82
278
99d635926ef3 ceriumCreateAnyState implemented
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 277
diff changeset
83 ceriumCreateAnyState(s.tg);
268
0e423d9f9647 remove error (remain 1 warning(no use variable))
Masataka Kohagura <kohagura@cr.ie.u-ryukyu.ac.jp>
parents: 266
diff changeset
84
266
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
85 FileMapReduce *fmp = new FileMapReduce(manager,TASK_EXEC,TASK_EXEC_DATA_PARALLEL,TASK_PRINT);
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
86 filename = fmp->init(argc, argv);
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
87 fmp->w->global = (void*)s.tg;
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
88 if (filename < 0) {
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
89 return -1;
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
90 }
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
91 fmp->division_out_size = sizeof(void*)*3; // *Result,*blockBegin,*blockEnd
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
92 task_init();
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
93 fmp->run_start(manager, filename);
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
94 manager->set_TMend(TMend);
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
95 return 0;
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
96 }
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
97
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
98 void
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
99 TMend(TaskManager *manager)
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
100 {
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
101 ed_time = getTime();
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
102 printf("Time: %0.6f\n",ed_time-st_time);
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
103 }
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
104
e51cac73e42a CeriumGrep start
masa
parents:
diff changeset
105 /* end */